usefragsph not on
There are 38 ligand heavy atoms
Ligand center of coords (x y z): 7.56202631578948 30.3506842105263 56.6366578947368
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1216
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 731
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 730
Number of spheres polar: 199, nonpolar: 365, out of current total: 730
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -2.20275 17.37398 20.46243 40.34061 47.23097 66.58959
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 379
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 333
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 262
Spheres center of coords (x y z): 7.79542343511451 31.0274817557252 59.4340248473282
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.32331834919078
Final number of output spheres is: 60
Number of polar spheres: 19
Number of nonpolar spheres: 35
Number of spheres that are near neither polar nor nonpolar receptor atoms: 6
Final number of spheres that are from crystallographic ligand: 38