usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): -4.30548275862069 10.0819310344828 22.5425517241379
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1177
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 657
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 647
Number of spheres polar: 232, nonpolar: 266, out of current total: 647
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -14.22082 4.20914 0.16162 20.00715 12.86921 32.52098
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 352
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 302
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 271
Spheres center of coords (x y z): -4.48734837638377 12.1076686715867 21.0505836162362
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.84676182049355
Final number of output spheres is: 60
Number of polar spheres: 16
Number of nonpolar spheres: 28
Number of spheres that are near neither polar nor nonpolar receptor atoms: 16
Final number of spheres that are from crystallographic ligand: 29