There are 12 ligand heavy atoms Ligand center of coords (x y z): 32.6723333333333 -7.514 66.5871666666667 useligsph not on Starting number of spheres from sph/sph cluster 0: 826 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 734 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 733 Number of spheres polar: 437, nonpolar: 145, out of current total: 733 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 20.69422 44.65323 -19.47129 2.44846 55.07050 78.58701 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 216 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 145 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 32.6723333333333 -7.514 66.5871666666667 Center point: 130 xyz: 33.49060 -7.54858 66.64366 After continuity checking, number of spheres is: 90 Final number of output spheres is: 90 Number of polar spheres: 47 Number of nonpolar spheres: 19 Number of spheres that are near neither polar nor nonpolar receptor atoms: 24 Final number of spheres that are from crystallographic ligand: 0