usefragsph not on
There are 30 ligand heavy atoms
Ligand center of coords (x y z): 8.25783333333333 5.8856 22.1795
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1339
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 759
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 759
Number of spheres polar: 256, nonpolar: 307, out of current total: 759
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -1.72669 18.22458 -3.98613 15.68739 12.23133 32.14563
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 381
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 332
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 314
Spheres center of coords (x y z): 6.30691238853503 6.35586455414012 21.3713679299363
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.66248069091442
Final number of output spheres is: 60
Number of polar spheres: 19
Number of nonpolar spheres: 26
Number of spheres that are near neither polar nor nonpolar receptor atoms: 15
Final number of spheres that are from crystallographic ligand: 30