usefragsph not on
There are 28 ligand heavy atoms
Ligand center of coords (x y z): 8.15085714285714 6.05028571428571 21.67525
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1181
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 634
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 634
Number of spheres polar: 191, nonpolar: 265, out of current total: 634
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -1.78405 17.75503 -3.92685 15.96132 11.76540 31.53125
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 364
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 306
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 269
Spheres center of coords (x y z): 6.51284973977695 6.43474966542751 20.2329335687732
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.22057644467427
Final number of output spheres is: 60
Number of polar spheres: 16
Number of nonpolar spheres: 25
Number of spheres that are near neither polar nor nonpolar receptor atoms: 19
Final number of spheres that are from crystallographic ligand: 28