usefragsph not on
There are 39 ligand heavy atoms
Ligand center of coords (x y z): 15.3302051282051 5.09684615384615 27.503641025641
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2143
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1024
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1024
Number of spheres polar: 272, nonpolar: 389, out of current total: 1024
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 5.59761 25.30046 -4.89668 15.08332 17.52621 37.48914
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 595
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 508
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 492
Spheres center of coords (x y z): 16.8056381097561 7.67919642276423 25.7883600406504
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.55915007128988
Final number of output spheres is: 60
Number of polar spheres: 22
Number of nonpolar spheres: 27
Number of spheres that are near neither polar nor nonpolar receptor atoms: 11
Final number of spheres that are from crystallographic ligand: 39