usefragsph not on
There are 33 ligand heavy atoms
Ligand center of coords (x y z): 9.65963636363636 62.7697575757576 3.96093939393939
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1241
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 780
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 774
Number of spheres polar: 254, nonpolar: 326, out of current total: 774
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -0.23157 18.44715 52.83304 72.73500 -5.92891 13.94691
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 406
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 358
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 327
Spheres center of coords (x y z): 8.19395079510704 63.7796054740061 2.71357204892966
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.54350964060231
Final number of output spheres is: 60
Number of polar spheres: 17
Number of nonpolar spheres: 28
Number of spheres that are near neither polar nor nonpolar receptor atoms: 15
Final number of spheres that are from crystallographic ligand: 33