usefragsph not on
There are 33 ligand heavy atoms
Ligand center of coords (x y z): 9.99109090909091 63.6950606060606 3.85048484848485
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1083
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 682
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 678
Number of spheres polar: 232, nonpolar: 281, out of current total: 678
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 0.07061 19.98636 53.73781 73.66688 -6.07891 13.65055
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 365
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 315
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 252
Spheres center of coords (x y z): 8.40361837301587 62.8982772222222 2.73405984126984
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.55408522862202
Final number of output spheres is: 60
Number of polar spheres: 14
Number of nonpolar spheres: 33
Number of spheres that are near neither polar nor nonpolar receptor atoms: 13
Final number of spheres that are from crystallographic ligand: 33