There are 32 ligand heavy atoms Ligand center of coords (x y z): 4.5575 9.00040625 27.69475 useligsph not on Starting number of spheres from sph/sph cluster 0: 1175 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 860 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 856 Number of spheres polar: 365, nonpolar: 283, out of current total: 856 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -7.31718 16.43288 -2.42410 20.98976 15.70174 39.56623 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 297 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 239 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 4.5575 9.00040625 27.69475 Center point: 192 xyz: 4.23173 9.12969 28.32871 After continuity checking, number of spheres is: 187 Spheres center of coords (x y z): 2.26812625668449 9.5920879144385 29.3608560962567 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 14.864959384858 0.46653272870663 29.0467283123028 Average weighted-distance for final elimination is: 33.0690001433293 Final number of output spheres is: 120 Number of polar spheres: 53 Number of nonpolar spheres: 35 Number of spheres that are near neither polar nor nonpolar receptor atoms: 32 Final number of spheres that are from crystallographic ligand: 0