usefragsph not on
There are 32 ligand heavy atoms
Ligand center of coords (x y z): 4.5575 9.00040625 27.69475
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1175
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 713
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 709
Number of spheres polar: 286, nonpolar: 246, out of current total: 709
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -5.23316 14.43837 -0.79195 18.94633 17.70104 37.68874
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 370
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 321
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 295
Spheres center of coords (x y z): 2.75517145762712 8.96861779661018 28.8305552542373
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.26335924524071
Final number of output spheres is: 60
Number of polar spheres: 22
Number of nonpolar spheres: 30
Number of spheres that are near neither polar nor nonpolar receptor atoms: 8
Final number of spheres that are from crystallographic ligand: 32