usefragsph not on
There are 38 ligand heavy atoms
Ligand center of coords (x y z): 3.35186842105263 8.47236842105263 27.2961842105263
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1113
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 653
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 648
Number of spheres polar: 223, nonpolar: 221, out of current total: 648
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -5.87063 13.26244 -1.50043 18.46646 17.29828 37.01498
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 378
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 321
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 295
Spheres center of coords (x y z): 1.86028430508475 8.37274386440678 28.472406440678
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.58013202896866
Final number of output spheres is: 60
Number of polar spheres: 18
Number of nonpolar spheres: 32
Number of spheres that are near neither polar nor nonpolar receptor atoms: 10
Final number of spheres that are from crystallographic ligand: 38