There are 32 ligand heavy atoms Ligand center of coords (x y z): 2.1616875 -8.645875 -13.3505625 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 14132 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 9430 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 9430 Number of spheres polar: 6045, nonpolar: 2529, out of current total: 9430 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -9.83260 14.15180 -20.63980 3.34580 -25.34280 -1.36820 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 1298 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 612 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 592 Spheres center of coords (x y z): -1.09759425675676 -10.4359736486487 -13.6417935810811 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 9.2381634656903 Final number of output spheres is: 120 Number of polar spheres: 64 Number of nonpolar spheres: 48 Number of spheres that are near neither polar nor nonpolar receptor atoms: 8 Final number of spheres that are from crystallographic ligand: 32