Distance from surface specified: 1.80 There are 32 ligand heavy atoms Ligand center of coords (x y z): 2.1616875 -8.645875 -13.3505625 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 14132 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (14 angstroms): 10982 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<2 angstroms): 10552 Number of spheres polar: 6550, nonpolar: 3092, out of current total: 10552 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -11.83320 16.01520 -22.57160 5.35020 -27.33040 0.63700 Number of spheres after removing spheres too close to each other (approximately <1.4 angstroms): 1341 Number of spheres after second pass removing spheres absolutely <0.9 from each other: 748 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 703 Spheres center of coords (x y z): -1.2267652916074 -10.9336953058322 -12.8309029871977 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 10.1023652324895 Final number of output spheres is: 200 Number of polar spheres: 114 Number of nonpolar spheres: 74 Number of spheres that are near neither polar nor nonpolar receptor atoms: 12 Final number of spheres that are from crystallographic ligand: 32