usefragsph not on
There are 39 ligand heavy atoms
Ligand center of coords (x y z): 31.4599743589744 7.73771794871795 9.46261538461539
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1274
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 594
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 560
Number of spheres polar: 180, nonpolar: 217, out of current total: 560
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 21.48311 41.42917 -2.14181 17.68676 -0.49236 19.25641
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 343
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 307
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 243
Spheres center of coords (x y z): 32.0706787654321 7.2120646090535 8.56920699588477
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.32148051994906
Final number of output spheres is: 60
Number of polar spheres: 22
Number of nonpolar spheres: 20
Number of spheres that are near neither polar nor nonpolar receptor atoms: 18
Final number of spheres that are from crystallographic ligand: 39