usefragsph not on
There are 25 ligand heavy atoms
Ligand center of coords (x y z): 30.93412 6.93676 10.80684
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1407
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 773
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 751
Number of spheres polar: 241, nonpolar: 311, out of current total: 751
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 20.95700 40.93220 -3.03455 16.69322 0.84017 20.76538
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 277
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 239
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 230
Spheres center of coords (x y z): 32.7880205652174 5.90758621739131 9.43367447826087
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.70059865322028
Final number of output spheres is: 45
Number of polar spheres: 19
Number of nonpolar spheres: 16
Number of spheres that are near neither polar nor nonpolar receptor atoms: 10
Final number of spheres that are from crystallographic ligand: 25