usefragsph not on
There are 41 ligand heavy atoms
Ligand center of coords (x y z): 35.313 6.27058536585366 10.6795365853659
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1702
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 938
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 928
Number of spheres polar: 229, nonpolar: 447, out of current total: 928
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 25.35946 45.20636 -3.72519 16.20319 0.68534 20.67227
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 351
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 314
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 297
Spheres center of coords (x y z): 35.4950224579125 5.34166774410774 9.73859175084175
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.6611373373885
Final number of output spheres is: 45
Number of polar spheres: 11
Number of nonpolar spheres: 29
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 41