usefragsph not on
There are 34 ligand heavy atoms
Ligand center of coords (x y z): 13.5292647058824 6.01826470588235 52.5252058823529
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1170
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 684
WARNING: removing a crystallographic sphere that is distance 0.736432617419949 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 682
Number of spheres polar: 240, nonpolar: 273, out of current total: 682
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 3.54272 23.50234 -3.26502 15.80479 42.60819 62.28584
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 389
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 340
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 314
Spheres center of coords (x y z): 12.6628295541401 5.70977716560509 54.6441571656051
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.32408350379582
Final number of output spheres is: 60
Number of polar spheres: 31
Number of nonpolar spheres: 17
Number of spheres that are near neither polar nor nonpolar receptor atoms: 12
Final number of spheres that are from crystallographic ligand: 33