usefragsph not on
There are 28 ligand heavy atoms
Ligand center of coords (x y z): -0.495607142857143 10.8195 7.28357142857143
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1381
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 814
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 814
Number of spheres polar: 186, nonpolar: 440, out of current total: 814
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -10.45771 9.43221 0.86071 20.81588 -2.68328 17.21864
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 437
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 381
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 366
Spheres center of coords (x y z): -1.25719540983607 9.35623336065574 8.28682784153006
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.81744248116704
Final number of output spheres is: 60
Number of polar spheres: 15
Number of nonpolar spheres: 44
Number of spheres that are near neither polar nor nonpolar receptor atoms: 1
Final number of spheres that are from crystallographic ligand: 28