Creating binding-site residue list Creating molecular surface real 0m2.829s user 0m0.365s sys 0m0.295s Creating sphgen spheres Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 0:1434 spheres. 107. 111. 113. 116. 116. 116. 116. 116. 116. 116. 116. 116. 116. 116. 116. 116. 116. 116. 116. 116. 116. 116. 116. 116. 116. 116. 116. 117. 117. 117. 117. 117. 117. 117. 117. 117. 117. 117. 117. 117. 117. 117. 117. 117. 117. 117. 117. 117. 121. 121. 121. 121. 122. 122. 122. 122. 122. 122. 123. 123. 123. 123. 123. 123. 125. 125. 125. 126. 126. 126. 126. 126. 127. 127. 127. 127. 127. 127. 127. 127. 127. 127. 127. 127. 128. 128. 128. 128. 128. 128. 128. 128. 128. 128. 128. 128. 129. 130. 130. 130. 130. 130. 130. 130. 130. 131. 131. 131. 131. 131. 131. 131. 131. 131. 131. 131. 131. 131. 131. 131. 131. 131. 131. 131. 131. 131. 131. 133. 133. 133. 133. 133. 133. 133. 133. 133. 133. 138. 139. 139. 139. 139. 139. 139. 139. 139. 139. 139. 139. 139. 139. 139. 139. 139. 139. 139. 139. 140. 140. 140. 140. 140. 140. 140. 140. 141. 142. 142. 142. 142. 142. 142. 142. 142. 143. 143. 143. 143. 143. 143. 143. 143. 143. 143. 143. 143. 144. 144. 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426. 426. 426. 426. 426. 426. 426. 426. 426. 426. 426. 428. 429. 429. 429. 429. 429. 429. 429. 429. 429. 453. 453. 453. 453. 453. 453. 453. 453. 453. 453. 453. 453. 453. 453. 453. 453. 453. 453. 453. 527. 528. 528. 528. 528. 528. 528. 528. 528. 528. 535. 535. 535. 535. 536. 536. 536. 537. 538. 538. 538. 538. 544. 545. 545. 545. 545. 545. 545. 545. 545. 545. 545. 545. 545. 545. 545. 545. 545. 545. 545. 546. 546. 546. 546. 546. 546. 546. 546. 546. 546. 546. 546. 546. 546. 546. 546. 546. 546. 546. 546. 546. 548. 551. 552. 552. 552. 552. 552. 552. 552. 555. 563. 641. 641. 655. 655. 655. 655. 655. 655. 655. 655. 656. 656. 656. 656. 660. 662. 662. 664. 664. 664. 664. 664. 664. 665. 665. 665. 666. 667. 667. 671. 671. 671. 671. 671. 671. 671. 671. 671. 671. 671. 671. 671. 671. 674. 674. 675. 675. 675. 675. 675. 675. 675. 675. 675. 676. 679. 679. 680. 680. 680. 680. 685. 685. 685. 685. 685. 685. 685. 685. 685. 685. 685. 687. 687. 687. 687. 687. 687. 687. 687. 687. 687. 687. 687. 687. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 688. 691. 691. 691. 691. 692. 692. 692. 692. 692. 692. 692. 692. 692. 692. 692. 692. 692. 692. 692. 692. 692. 692. 692. 692. 692. 696. 696. 696. 696. 696. 696. 696. 698. 698. 698. 698. 698. 698. 698. 698. 698. 698. 698. 698. 698. 698. 698. 698. 698. 698. 698. 698. 698. 698. 698. 698. 698. 698. 698. 698. 698. 701. 701. 704. 704. 705. 705. 705. 705. 705. 705. 705. 706. 706. 706. 706. 706. 706. 706. 706. 707. 707. 707. 707. 707. 707. 707. 707. 707. 707. 707. 707. 707. 707. 707. 707. 707. 707. 707. 707. 707. 707. 707. 707. 707. 707. 707. 707. 707. 707. 707. 707. 707. 708. 708. 708. 708. 708. 708. 708. 708. 708. 708. 708. 709. 709. 709. 709. 709. 709. 709. 709. 709. 709. 709. 709. 709. 709. 709. 709. 709. 709. 709. 709. 709. 722. 722. 722. 722. 722. 722. 722. 722. 722. 722. 724. 724. 724. 724. 724. 724. 724. 724. 724. 724. 724. 724. 724. 724. 724. 724. 724. 724. 724. 724. 724. 724. 724. 724. 724. 724. 724. 724. 724. 724. 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734.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1020.1024.1024.1024.1025.1025.1026.1042.1045.1045.1045.1045.1045.1045.1045.1045.1045.1045.1045.1045.1045.1045.1045.1045.1045.1045.1045.1045.1045.1054.1054.1054.1054.1054.1054.1054.1057.1067.1067.1067.1067.1067.1067.1067.1067.1067.1067.1068.1068.1068.1068.1068.1068.1068.1068.1068.1068.1068.1068.1068.1068.1068.1068.1068.1068.1068.1068.1068.1068.1068.1069.1069.1069.1069.1070.1070.1070.1070.1070.1070.1070.1070.1070.1070.1070.1070.1070.1070.1070.1070.1070.1070.1070.1070.1070.1070.1070.1070.1070.1070.1070.1070.1071.1071.1073.1076.1076.1076.1076.1076.1077.1079.1081.1081.1081.1089.1089.1089.1089.1089.1089.1089.1089.1089.1089.1089.1089.1089.1089.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1096.1097.1097.1097.1097.1097.1097.1097.1097.1097.1097.1097.1097.1097.1097.1097.1097.1097.1097.1097.1097.1097.1097.1097.1097.1097.1097.1097.1097.1106.1109.1109.1109.1109.1109.1109.1109.1109.1109.1109.1110.1110.1115.1115.1116.1154.1154.1154.1154.1154.1154.1154.1154.1154.1154.1154.1154.1154.1154.1162.1162.1162.1162.1162.1162.1162.1162.1162.1162.1162.1162.1162.1162.1162.1162.1162.1162.1162.1162.1162.1162.1162.1162.1162.1162.1162.1164.1164.1164.1165.1167.1167.1167.1167.1171.1171.1171.1171.1171.1171.1173.1178.1178.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1179.1180.1180.1180.1182.1182.1182.1186.1187.1187.1187.1187.1189.1189.1192.1192.1193.1193.1193.1193.1193.1193.1193.1193.1193.1193.1193.1193.1193.1193.1193.1194.1194.1194.1194.1194.1194.1194.1194.1194.1194.1194.1194.1194.1196.1196.1196.1196.1196.1196.1196.1196.1196.1196.1196.1196.1196.1196.1196.1196.1196.1196.1196.1196.1196.1196.1196.1196.1196.1196.1196.1196.1197.1197.1197.1197.1197.1197.1197.1197.1197.1200.1200.1200.1201.1201.1203.1203.1207.1207.1207.1208.1208.1208.1208.1209.1209.1209.1209.1209.1209.1209.1209.1209.1209.1209.1210.1210.1210.1210.1210.1210.1210.1210.1210.1210.1210.1210.1210.1210.1210.1210.1210.1210.1210.1210.1210.1210.1210.1210.1210.1210.1210.1211.1211.1211.1211.1211.1211.1211.1211.1212.1212.1212.1212.1212.1212.1212.1212.1212.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1213.1214.1214.1214.1214.1214.1214.1214.1214.1214.1214.1214.1214.1214.1214.1214.1214.1214.1216.1217.1217.1217.1217.1217.1217.1217.1217.1217.1217.1217.1217.1217.1217.1217.1217.1217.1217.1217.1217.1217.1218.1218.1218.1218.1218.1218.1219.1219.1219.1219.1219.1219.1221.1221.1223.1223.1223.1223.1223.1223.1223.1223.1223.1223.1223.1223.1223.1223.1225.1225.1225.1226.1226.1226.1226.1226.FORTRAN STOP Generating faster matching2 spheres for docking Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 45 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.FORTRAN STOP Coloring matching spheres Creating box around spheres Hydrogen solvent excluded grid being made FORTRAN STOP real 24m47.289s user 24m45.439s sys 0m0.281s Heavy solvent excluded grid being made FORTRAN STOP real 33m37.991s user 33m37.637s sys 0m0.078s