usefragsph not on
There are 25 ligand heavy atoms
Ligand center of coords (x y z): 9.07212 3.7096 23.70672
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1014
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 603
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 598
Number of spheres polar: 138, nonpolar: 244, out of current total: 598
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -0.91219 18.95793 -6.23870 13.67923 13.71811 33.69925
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 397
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 359
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 338
Spheres center of coords (x y z): 9.04469304733727 4.53030642011834 22.8222632248521
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.68935617266839
Final number of output spheres is: 60
Number of polar spheres: 17
Number of nonpolar spheres: 35
Number of spheres that are near neither polar nor nonpolar receptor atoms: 8
Final number of spheres that are from crystallographic ligand: 25