usefragsph not on
There are 38 ligand heavy atoms
Ligand center of coords (x y z): 7.47568421052632 5.08842105263158 20.8009210526316
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1730
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 829
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 827
Number of spheres polar: 216, nonpolar: 329, out of current total: 827
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -2.26081 17.36897 -4.90473 15.06954 10.80316 30.83800
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 499
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 433
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 401
Spheres center of coords (x y z): 9.61679965087282 8.10183957605985 20.1476806234414
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.7313008295006
Final number of output spheres is: 60
Number of polar spheres: 20
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 38