usefragsph not on
There are 50 ligand heavy atoms
Ligand center of coords (x y z): 7.93064 0.4032 -5.33828
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1464
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 677
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 661
Number of spheres polar: 191, nonpolar: 279, out of current total: 661
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -1.98409 17.35177 -9.59085 10.39975 -15.32426 4.59367
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 272
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 222
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 50
Spheres center of coords (x y z): 7.93064 0.4032 -5.33828
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 1.14101693091027
WARNING: removing a crystallographic sphere since 50>45 max spheres are present
WARNING: removing a crystallographic sphere since 49>45 max spheres are present
WARNING: removing a crystallographic sphere since 48>45 max spheres are present
WARNING: removing a crystallographic sphere since 47>45 max spheres are present
WARNING: removing a crystallographic sphere since 46>45 max spheres are present
Final number of output spheres is: 45
Number of polar spheres: 5
Number of nonpolar spheres: 27
Number of spheres that are near neither polar nor nonpolar receptor atoms: 13
Final number of spheres that are from crystallographic ligand: 45