usefragsph not on
There are 31 ligand heavy atoms
Ligand center of coords (x y z): 45.9669032258064 11.2503870967742 57.35
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1351
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 806
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 803
Number of spheres polar: 281, nonpolar: 397, out of current total: 803
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 36.10250 55.95777 1.28829 21.15096 47.57605 67.21307
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 263
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 220
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 207
Spheres center of coords (x y z): 47.8934751207729 11.6124560386473 56.8094261835749
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.84467235337962
Final number of output spheres is: 45
Number of polar spheres: 13
Number of nonpolar spheres: 28
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 31