usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): 17.702 133.729862068966 -1.46127586206897
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1389
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1041
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1041
Number of spheres polar: 237, nonpolar: 421, out of current total: 1041
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 8.94843 27.63023 124.16245 143.69897 -11.10716 8.39771
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 582
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 510
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 501
Spheres center of coords (x y z): 19.2071650499002 135.20916512974 -1.10358173652695
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.28118359077264
Final number of output spheres is: 60
Number of polar spheres: 9
Number of nonpolar spheres: 19
Number of spheres that are near neither polar nor nonpolar receptor atoms: 32
Final number of spheres that are from crystallographic ligand: 29