usefragsph not on
There are 24 ligand heavy atoms
Ligand center of coords (x y z): 21.062375 129.803415 -1.68670833333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1692
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1024
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1024
Number of spheres polar: 380, nonpolar: 502, out of current total: 1024
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 11.30267 31.05321 119.90849 139.80315 -11.61200 8.24140
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 483
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 404
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 377
Spheres center of coords (x y z): 21.3756327851459 133.419099204244 0.671396127320956
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.25455762541484
Final number of output spheres is: 60
Number of polar spheres: 34
Number of nonpolar spheres: 18
Number of spheres that are near neither polar nor nonpolar receptor atoms: 8
Final number of spheres that are from crystallographic ligand: 24