usefragsph not on
There are 15 ligand heavy atoms
Ligand center of coords (x y z): 17.6756 129.537400666667 -2.46733333333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1382
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 881
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 881
Number of spheres polar: 304, nonpolar: 375, out of current total: 881
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 9.12807 27.65028 124.58341 139.52924 -12.44027 7.52731
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 439
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 355
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 333
Spheres center of coords (x y z): 20.564043963964 133.616424954955 -0.362906546546546
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.7141885900098
Final number of output spheres is: 60
Number of polar spheres: 15
Number of nonpolar spheres: 39
Number of spheres that are near neither polar nor nonpolar receptor atoms: 6
Final number of spheres that are from crystallographic ligand: 15