usefragsph not on
There are 43 ligand heavy atoms
Ligand center of coords (x y z): 17.0561627906977 -73.5730697674419 3.58241860465116
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1552
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 915
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 914
Number of spheres polar: 188, nonpolar: 388, out of current total: 914
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 8.68654 27.04402 -80.77731 -63.57647 -6.27852 13.56052
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 524
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 472
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 466
Spheres center of coords (x y z): 18.0387763733905 -70.6960245708154 3.205019527897
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.49713597061139
Final number of output spheres is: 60
Number of polar spheres: 9
Number of nonpolar spheres: 29
Number of spheres that are near neither polar nor nonpolar receptor atoms: 22
Final number of spheres that are from crystallographic ligand: 43