usefragsph not on
There are 24 ligand heavy atoms
Ligand center of coords (x y z): 104.856916666667 25.438375 32.5147083333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1731
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 938
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 938
Number of spheres polar: 375, nonpolar: 412, out of current total: 938
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 94.91830 114.78408 15.45495 33.65139 22.58775 42.05307
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 267
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 206
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 171
Spheres center of coords (x y z): 107.108912339181 22.322670994152 30.4592795906433
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.08434733907844
Final number of output spheres is: 45
Number of polar spheres: 21
Number of nonpolar spheres: 21
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 24