usefragsph not on
There are 24 ligand heavy atoms
Ligand center of coords (x y z): 104.856916666667 25.438375 32.5147083333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1731
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 938
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 938
Number of spheres polar: 375, nonpolar: 412, out of current total: 938
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 94.91830 114.78408 15.45495 33.65139 22.58775 42.05307
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 429
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 374
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 319
Spheres center of coords (x y z): 106.754545297806 22.5590378996865 30.8581154858934
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.83862132498053
Final number of output spheres is: 60
Number of polar spheres: 30
Number of nonpolar spheres: 23
Number of spheres that are near neither polar nor nonpolar receptor atoms: 7
Final number of spheres that are from crystallographic ligand: 24