usefragsph not on
There are 48 ligand heavy atoms
Ligand center of coords (x y z): 187.447332291667 126.038958333333 31.4844583333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1717
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 887
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 887
Number of spheres polar: 199, nonpolar: 358, out of current total: 887
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 179.78687 197.42188 118.04541 135.95746 21.51894 40.96014
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 351
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 279
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 48
Spheres center of coords (x y z): 187.447332291667 126.038958333333 31.4844583333333
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 1.23754019453255
WARNING: removing a crystallographic sphere since 48>45 max spheres are present
WARNING: removing a crystallographic sphere since 47>45 max spheres are present
WARNING: removing a crystallographic sphere since 46>45 max spheres are present
Final number of output spheres is: 45
Number of polar spheres: 2
Number of nonpolar spheres: 27
Number of spheres that are near neither polar nor nonpolar receptor atoms: 16
Final number of spheres that are from crystallographic ligand: 45