usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): 31.7920689655172 90.9527931034483 64.0262068965517
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1287
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 969
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 967
Number of spheres polar: 244, nonpolar: 400, out of current total: 967
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 21.83377 39.55867 81.14697 99.77407 54.05296 72.41488
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 519
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 446
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 433
Spheres center of coords (x y z): 29.7733902540415 90.2643587066975 62.4234159584296
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.00433278073044
Final number of output spheres is: 60
Number of polar spheres: 7
Number of nonpolar spheres: 33
Number of spheres that are near neither polar nor nonpolar receptor atoms: 20
Final number of spheres that are from crystallographic ligand: 29