usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): 30.9626206896552 92.1279310344828 63.3730344827586
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1739
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1061
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1061
Number of spheres polar: 294, nonpolar: 574, out of current total: 1061
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 20.96493 40.18409 82.13719 102.12387 53.38110 73.02460
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 507
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 425
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 406
Spheres center of coords (x y z): 28.7785077832512 90.2913373399015 62.1454731527094
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.96352942333397
Final number of output spheres is: 60
Number of polar spheres: 21
Number of nonpolar spheres: 33
Number of spheres that are near neither polar nor nonpolar receptor atoms: 6
Final number of spheres that are from crystallographic ligand: 29