usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): 30.9081724137931 91.778 63.2638275862069
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1716
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1030
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1030
Number of spheres polar: 309, nonpolar: 539, out of current total: 1030
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 20.95295 39.34128 81.77962 101.70708 53.27587 72.37323
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 491
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 414
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 396
Spheres center of coords (x y z): 28.9075583333333 89.8165371969696 61.7067607575757
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.06802361063135
Final number of output spheres is: 60
Number of polar spheres: 25
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 29