usefragsph not on
There are 39 ligand heavy atoms
Ligand center of coords (x y z): 15.8866153846154 130.220847179487 0.891076923076924
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1627
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1012
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1010
Number of spheres polar: 194, nonpolar: 430, out of current total: 1010
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 6.90489 25.88101 120.22099 140.11501 -9.10798 10.78558
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 620
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 548
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 540
Spheres center of coords (x y z): 17.3740875740741 129.935152074074 -0.522620222222222
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.82880381140961
Final number of output spheres is: 60
Number of polar spheres: 10
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 19
Final number of spheres that are from crystallographic ligand: 39