usefragsph not on
There are 35 ligand heavy atoms
Ligand center of coords (x y z): 52.9036571428571 -50.5254285714286 3.63985714285714
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1643
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1096
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1096
Number of spheres polar: 243, nonpolar: 427, out of current total: 1096
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 42.94103 62.89851 -60.32078 -40.59468 -6.34250 13.26888
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 648
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 576
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 562
Spheres center of coords (x y z): 51.2743279003558 -49.5101768149466 2.56661633451958
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.36753262968878
Final number of output spheres is: 60
Number of polar spheres: 6
Number of nonpolar spheres: 17
Number of spheres that are near neither polar nor nonpolar receptor atoms: 37
Final number of spheres that are from crystallographic ligand: 35