usefragsph not on
There are 35 ligand heavy atoms
Ligand center of coords (x y z): 58.1138571428571 -48.4946571428572 -2.66377142857143
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1650
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 940
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 940
Number of spheres polar: 248, nonpolar: 379, out of current total: 940
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 48.13800 67.13303 -58.41201 -38.72966 -12.65393 7.26795
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 538
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 471
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 463
Spheres center of coords (x y z): 55.8204411015119 -49.8514634989201 -3.55829846652268
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.90517645231091
Final number of output spheres is: 60
Number of polar spheres: 20
Number of nonpolar spheres: 30
Number of spheres that are near neither polar nor nonpolar receptor atoms: 10
Final number of spheres that are from crystallographic ligand: 35