There are 43 ligand heavy atoms
Ligand center of coords (x y z): 17.0561627906977 -23.5730697674419 3.58241860465116
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 12932
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 9172
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 9172
Number of spheres polar: 5373, nonpolar: 2677, out of current total: 9172
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 5.05740 29.04800 -34.19820 -11.58800 -8.41040 15.58080
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 973
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 561
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 555
Spheres center of coords (x y z): 18.7927365765766 -19.3655196396397 2.28083063063063
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.36640437459413
Final number of output spheres is: 120
Number of polar spheres: 51
Number of nonpolar spheres: 55
Number of spheres that are near neither polar nor nonpolar receptor atoms: 14
Final number of spheres that are from crystallographic ligand: 43