usefragsph not on
There are 20 ligand heavy atoms
Ligand center of coords (x y z): 15.665 -32.6487 25.8623
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1451
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 810
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 807
Number of spheres polar: 411, nonpolar: 308, out of current total: 807
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 5.75049 25.57252 -42.64085 -22.80219 15.87272 35.45160
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 250
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 197
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 150
Spheres center of coords (x y z): 13.4524892 -35.8965796 25.2067200666667
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.91389119592212
Final number of output spheres is: 45
Number of polar spheres: 29
Number of nonpolar spheres: 11
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 20