usefragsph not on
There are 17 ligand heavy atoms
Ligand center of coords (x y z): 3.58635294117647 75.735 28.2723529411765
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1708
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1050
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1050
Number of spheres polar: 360, nonpolar: 449, out of current total: 1050
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -6.38878 13.54744 65.74968 83.62892 18.29166 38.13318
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 570
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 484
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 453
Spheres center of coords (x y z): 5.04798251655629 71.1721913686534 28.4969849668874
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.40417675934301
Final number of output spheres is: 60
Number of polar spheres: 19
Number of nonpolar spheres: 36
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 17