usefragsph not on
There are 18 ligand heavy atoms
Ligand center of coords (x y z): 4.5065 75.6489444444444 28.7637222222222
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1510
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 852
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 851
Number of spheres polar: 226, nonpolar: 483, out of current total: 851
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -5.47666 14.47840 65.73950 83.10880 18.88483 38.63462
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 445
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 388
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 369
Spheres center of coords (x y z): 6.49129029810298 71.7705551490515 27.9126337398374
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.36344478779705
Final number of output spheres is: 60
Number of polar spheres: 17
Number of nonpolar spheres: 41
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 18