There are 20 ligand heavy atoms Ligand center of coords (x y z): 3.60135 74.98755 27.7689 useligsph not on Starting number of spheres from sph/sph cluster 0: 1702 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 1395 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1388 Number of spheres polar: 416, nonpolar: 548, out of current total: 1388 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -8.33621 15.59301 62.99902 83.39137 15.81376 39.62061 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 490 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 393 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 3.60135 74.98755 27.7689 Center point: 87 xyz: 3.83266 75.11489 28.08690 After continuity checking, number of spheres is: 378 Spheres center of coords (x y z): 3.94506682539683 70.7431003439154 28.1102530687831 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 8.49315284441399 81.0430116518163 27.3303529814942 Average weighted-distance for final elimination is: 31.7126474160953 Final number of output spheres is: 120 Number of polar spheres: 53 Number of nonpolar spheres: 35 Number of spheres that are near neither polar nor nonpolar receptor atoms: 32 Final number of spheres that are from crystallographic ligand: 0