There are 16 ligand heavy atoms Ligand center of coords (x y z): 15.1554375 33.514625 -8.3803125 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 15303 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 10076 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 10076 Number of spheres polar: 5578, nonpolar: 2738, out of current total: 10076 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 3.15900 27.15180 21.51900 45.51140 -20.36680 3.59900 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 989 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 382 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 175 Spheres center of coords (x y z): 12.1155211428572 36.5537657142857 -5.38559542857143 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 7.85948294162379 Final number of output spheres is: 120 Number of polar spheres: 72 Number of nonpolar spheres: 25 Number of spheres that are near neither polar nor nonpolar receptor atoms: 23 Final number of spheres that are from crystallographic ligand: 16