usefragsph not on
There are 28 ligand heavy atoms
Ligand center of coords (x y z): 45.3238214285714 12.05075 -2.51182142857143
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1758
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 585
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 585
Number of spheres polar: 146, nonpolar: 374, out of current total: 585
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 35.37666 55.21787 2.06000 22.04416 -12.47725 7.48701
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 295
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 257
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 149
Spheres center of coords (x y z): 44.7508640939597 12.2235245637584 -2.89292758389262
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 2.4569608271707
Final number of output spheres is: 60
Number of polar spheres: 16
Number of nonpolar spheres: 35
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 28