There are 36 ligand heavy atoms
Ligand center of coords (x y z): 39.8517222222222 30.2946666666667 9.33466666666667
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 21979
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 11840
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 11840
Number of spheres polar: 6612, nonpolar: 4158, out of current total: 11840
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 27.85320 51.84960 18.29540 42.29240 -2.66260 21.31620
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 1223
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 521
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 295
Spheres center of coords (x y z): 43.0478325423729 28.0082 8.9527945762712
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.83954943965873
Final number of output spheres is: 120
Number of polar spheres: 46
Number of nonpolar spheres: 65
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 36