usefragsph not on
There are 11 ligand heavy atoms
Ligand center of coords (x y z): 13.5342727272727 41.1889090909091 -6.37409090909091
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 695
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 460
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 460
Number of spheres polar: 215, nonpolar: 169, out of current total: 460
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 3.64336 23.49984 31.50705 50.72638 -16.05411 3.50329
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 228
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 194
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 163
Spheres center of coords (x y z): 8.04571865030675 39.0333022699386 -6.76663355828221
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.516387788312
Final number of output spheres is: 60
Number of polar spheres: 28
Number of nonpolar spheres: 25
Number of spheres that are near neither polar nor nonpolar receptor atoms: 7
Final number of spheres that are from crystallographic ligand: 11