There are 10 ligand heavy atoms Ligand center of coords (x y z): 10.7943 -10.463 40.3026 useligsph not on Starting number of spheres from sph/sph cluster 0: 867 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 721 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 718 Number of spheres polar: 342, nonpolar: 220, out of current total: 718 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -1.17109 21.51455 -22.16241 1.48086 28.73586 51.45521 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 230 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 186 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 10.7943 -10.463 40.3026 Center point: 117 xyz: 11.13523 -10.19355 40.69675 After continuity checking, number of spheres is: 139 Spheres center of coords (x y z): 4.32008115107914 -10.8795444604317 42.606613381295 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 11.6059314121038 -10.8937050912584 38.8185819404419 Average weighted-distance for final elimination is: 26.8819214953754 Final number of output spheres is: 120 Number of polar spheres: 54 Number of nonpolar spheres: 40 Number of spheres that are near neither polar nor nonpolar receptor atoms: 26 Final number of spheres that are from crystallographic ligand: 0