Distance from surface specified: 1.80 There are 14 ligand heavy atoms Ligand center of coords (x y z): 36.1452142857143 31.9486428571429 0.963642857142857 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 10853 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (14 angstroms): 9587 WARNING: removing a crystallographic sphere that is distance 1.95143793137266 angstroms from closest receptor atom Number of spheres after removing too far (>7 angstroms) and too close to receptor (<2 angstroms): 9131 Number of spheres polar: 5980, nonpolar: 2703, out of current total: 9131 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 22.14620 50.02220 18.00780 45.94500 -13.01380 14.31280 Number of spheres after removing spheres too close to each other (approximately <1.4 angstroms): 1117 Number of spheres after second pass removing spheres absolutely <0.9 from each other: 484 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 424 Spheres center of coords (x y z): 36.5061650943397 38.4216599056604 -4.14985613207547 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 12.9275428119007 Final number of output spheres is: 200 Number of polar spheres: 128 Number of nonpolar spheres: 71 Number of spheres that are near neither polar nor nonpolar receptor atoms: 1 Final number of spheres that are from crystallographic ligand: 13