usefragsph not on
There are 15 ligand heavy atoms
Ligand center of coords (x y z): 15.8437333333333 1.5498 15.555
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1137
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 801
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 801
Number of spheres polar: 354, nonpolar: 370, out of current total: 801
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 5.88637 25.81800 -8.40275 11.54703 5.56816 25.35739
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 375
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 316
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 63
Spheres center of coords (x y z): 16.5660425396825 1.63068301587302 14.6013565079365
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 1.79172697099235
Final number of output spheres is: 60
Number of polar spheres: 31
Number of nonpolar spheres: 24
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 15