There are 13 ligand heavy atoms Ligand center of coords (x y z): 15.566 1.37753846153846 15.8329230769231 useligsph not on Starting number of spheres from sph/sph cluster 0: 876 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 771 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 771 Number of spheres polar: 370, nonpolar: 316, out of current total: 771 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 3.65966 27.54138 -10.47618 13.27638 4.92334 27.81738 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 254 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 180 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 15.566 1.37753846153846 15.8329230769231 Center point: 26 xyz: 15.98037 1.86764 15.82125 After continuity checking, number of spheres is: 100 Final number of output spheres is: 100 Number of polar spheres: 63 Number of nonpolar spheres: 31 Number of spheres that are near neither polar nor nonpolar receptor atoms: 6 Final number of spheres that are from crystallographic ligand: 0