usefragsph not on
There are 17 ligand heavy atoms
Ligand center of coords (x y z): 3.38635294117647 2.51217647058824 -29.4675294117647
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1478
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 979
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 979
Number of spheres polar: 382, nonpolar: 468, out of current total: 979
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -6.46259 13.36160 -7.40913 12.48758 -39.25773 -19.48800
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 274
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 210
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 204
Spheres center of coords (x y z): 6.82398588235294 2.99681926470588 -29.0943650490196
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.92082985845803
Final number of output spheres is: 45
Number of polar spheres: 21
Number of nonpolar spheres: 20
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 17